Stormboy,
Storms in their natural process go through stages - the developing stage, the mature stage and the dying stage. A supercell's dynamics is fairly complicated to explain in detail with the lack of time I have because a lot of favourable conditions must come together. I would suggest do a lot of reading on supercells right around the internet and brush up before even attempting to fully comprehend what what processes lead to cut off updrafts and tornadogenesis as well as cyclic mesocyclonic behaviour.
Generally though, it is believed all storms have more than one updraft and they are in different stages of development. In supercells, the most mature stage will have the strong tornadoes and these go through the rope out stage when the updraft occludes or goes through the stage of being cut off from the rest of the storm and eventually shrivels up.
As a case study, take for instance the event on May 12 2004. David Croan and I were top the east of the supercell that exploded and began to produce tornado after tornado - we captured 5 tornadoes including spinups. Three of those tornadoes were quite strong and you can see the sequence in these set of photographs:
http://www.australiasevereweather.com/photography/photos/2004/jd20040512.htmlJust for an illustration of what an occlusion looks like, check out tornado 1. You can see the base is ragged and the inflow cut is beginning to separate the tornado and its attached base from the rest of the storm above us.



Also check out the longer lasting tornado 2:






Even though the occlusion process is well under way by this last photgraph of this tornado, this is a better example where you can see the tornado is losing vertical tilt and becoming narrow. It roped out not long after this photograph. Also again you see a higher base and the cut off occurring.

Regards,
Jimmy Deguara